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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015940858.1_cds_XP_016484935.1_75903
CDS Infomation

[gene=LOC107805414] [db_xref=GeneID:107805414] [protein=CTP synthase-like isoform X2] [protein_id=XP_016484935.1] [location=join(26129..26246,26455..26534,27650..27736,27866..27916,27992..28109,28191..28247,28379..28443,28529..28612,28765..28815,28924..28986,29074..29120,29267..29336,29430..29492,29812..29901,29979..30017,30124..30351,30446..30531,31140..31218)] [gbkey=CDS]
Sequence

ATGAAATACGTGTTGGTAACTGGAGGAGTGGTTAGTGGGCTTGGCAAAGGAGTCACCGCC
AGCAGTATTGGTCTCATCCTTAAGGCTTGCGGTCTTCGGGTTACTTCCATTAAAATTGAT
CCTTATTTGAACACTGATGCTGGAACAATGTCTCCCTTCGAGCACGGAGAAGTATTCGTC
TTGGATGATGGTGGAGAGGTAGACCTAGACCTTGGAAACTACGAGCGTTTTCTGGATATT
AAGTTGACACGTGACAACAATATAACTACTGGAAAAATTTACCAGTCTGTTACTGATAAG
GAGAGAAAAGGAGATTATTTGGGGAAGACAGTTCAGGTTGTCCCTCACATTACAGATGCC
ATTCAAGAGTGGATTGAACGTGTGGCTGTCATACCAGTTGATGGAGAGGATGGTCCAGCT
GATGTTTGTGTCATAGAACTGGGTGGAACTATAGGAGATATTGAATCTATGCCATTCATT
GAAGCTTTAGGACAATTCTCATATCGTGTAGGTGCTGGAAATTTTTGCTTGATACATGTC
AGCCTTGTGCCCGTCTTGAATGTAGTTGGTGAGCAGAAAACAAAGCCAACTCAACACAGT
GTAAGGGGTTTGAGAAGCCTGGGACTGACACCAAATATTATAGCCTGCCGTAGCACAACG
GCACTTGATGATAATGTGAAGGAGAAACTTTCCCGTTTTTGTCATGTTCCGGTAGATAAT
ATCATCACTCTTTACGATGTCTCGAACATTTGGCGCGTGCCTTTGCTTTTAAGAGATCAG
AAGGCCCATGAAGCGATTCTGAAAGTCCTGAACCTTGATGGAGTTGCTAGGGAGCCTGCC
TTGGGAGAATGGACATCTCGGGCCGAACTTTGTGACATGCTACATGAGCCAGTTCGAGTT
GCCATGGTGGGGAAATACACAGGCCTTTCAGATTCCTATCTCTCTGTACTGAAGGCTCTT
TTGCATTCCTCTGTAGCTTGCCGCAGGAAACTTATTGTAGATTGGGTTCCAGCCAGTGAC
CTCGAAGATGAAACTGCCAAAGAGAATCCTGAAAATTATAGAAGTTCTTGGAATTTGTTG
AAGGGGGCTGATGCTGTACTAGTTCCCGGAGGATTTGGTGATAGAGGTGTGGAGGGTAAA
ATACTTGCTGCCAAATATGCCCGTGAAAACAGAATTCCTTTCCTTGGCATATGTCTAGGC
ATGCAAATTGCTGTTATCGAGTATGCTAGATCCATTCTTGGGTTGCAAGATGCGAACAGT
ACAGAGTTTGATCCCAACACTCAGAATCCGTGTGTAATATTTATGCCGGAGGGTTCAAAA
ACACATATGGGTGGTACCATGCGTCTTGGATCAAGAAGAACGTATTTTCAAGTCAGAGAT
TCTAAATCTGCAAAATTAAAAATCTCAATCTTTTGGGATTGTCAAACGAAGGGAGGAGTG
CCAAACAAATTGGGACAGAGGGAATACTTTTTCTAG

Peptide Sequence

PEP ID

XP_016484935.1
PEP Infomation

PREDICTED: CTP synthase-like isoform X2 [Nicotiana tabacum]
Sequence

MKYVLVTGGVVSGLGKGVTASSIGLILKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFV
LDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVTDKERKGDYLGKTVQVVPHITDA
IQEWIERVAVIPVDGEDGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGAGNFCLIHV
SLVPVLNVVGEQKTKPTQHSVRGLRSLGLTPNIIACRSTTALDDNVKEKLSRFCHVPVDN
IITLYDVSNIWRVPLLLRDQKAHEAILKVLNLDGVAREPALGEWTSRAELCDMLHEPVRV
AMVGKYTGLSDSYLSVLKALLHSSVACRRKLIVDWVPASDLEDETAKENPENYRSSWNLL
KGADAVLVPGGFGDRGVEGKILAAKYARENRIPFLGICLGMQIAVIEYARSILGLQDANS
TEFDPNTQNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVRDSKSAKLKISIFWDCQTKGGV
PNKLGQREYFF

Transcript Sequence

Gene sequence data has not been registered.